1Y3K
Solution structure of the apo form of the fifth domain of Menkes protein
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
3 | HCCH-TOCSY | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
4 | HNHA | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
5 | CBCANH | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
6 | CBCA(CO)NH | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
7 | HNCO | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 | |
8 | 2D NOESY | 1mM MNK5 domain U-15N,13C; 50mM phosphate buffer NA | 90% H2O/10% D2O | 50mM sodium phosphate | 7 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 900 |
3 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | The structures are based on NOE-derived distance constraints and dihedral angle restraints. | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.1 | |
2 | processing | XwinNMR | 3.1 | |
3 | data analysis | NEASY | ||
4 | structure solution | DYANA | ||
5 | refinement | Amber | 5.0 |