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Crystal Structure of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 291 PEG 550 MME, BisTris, pH 6.5, vapor diffusion, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.7 54.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 118.385 α = 90 b = 118.385 β = 90 c = 184.772 γ = 90
Symmetry Space Group I 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2003-09-05 M SINGLE WAVELENGTH 2 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS 2003-09-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 1.092 MAX II I711 2 ROTATING ANODE RIGAKU RU300 1.5405
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.5 200 99.5 0.046 15.5 5.6 22866 22866 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.5 2.6 97.8 0.272 3.7 5.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING THROUGHOUT 2.5 10 21448 1161 98.15 0.19608 0.19248 0.2551 0.26729 0.3295 RANDOM 57.306
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.68 -0.68 1.36
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.62 r_dihedral_angle_4_deg 21.223 r_dihedral_angle_3_deg 20.273 r_dihedral_angle_1_deg 6.993 r_scangle_it 2.619 r_angle_refined_deg 1.761 r_scbond_it 1.742 r_mcangle_it 0.97 r_mcbond_it 0.564 r_nbtor_refined 0.311
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.62 r_dihedral_angle_4_deg 21.223 r_dihedral_angle_3_deg 20.273 r_dihedral_angle_1_deg 6.993 r_scangle_it 2.619 r_angle_refined_deg 1.761 r_scbond_it 1.742 r_mcangle_it 0.97 r_mcbond_it 0.564 r_nbtor_refined 0.311 r_symmetry_vdw_refined 0.306 r_symmetry_hbond_refined 0.27 r_nbd_refined 0.227 r_xyhbond_nbd_refined 0.193 r_chiral_restr 0.161 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4210 Nucleic Acid Atoms Solvent Atoms 349 Heterogen Atoms 96
Software Software Software Name Purpose SHARP phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling