NMR structure of the carboxyl-terminal cysteine domain of the VHv1.1 polydnaviral gene product
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1mM C-term VHv1.1, 25mM phosphate buffer, 100mM NaCl, 1mM EDTA, 0.01% sodium azide | 95% H2O/5% D2O | 100mM NaCl | 5.7 | ambient | 310 | |
| 2 | 2D TOCSY | 1mM C-term VHv1.1, 25mM phosphate buffer, 100mM NaCl, 1mM EDTA, 0.01% sodium azide | 95% H2O/5% D2O | 100mM NaCl | 5.7 | ambient | 310 | |
| 3 | DQF-COSY | 1mM C-term VHv1.1, 25mM phosphate buffer, 100mM NaCl, 1mM EDTA, 0.01% sodium azide | 95% H2O/5% D2O | 100mM NaCl | 5.7 | ambient | 310 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics & simulated annealing protocol using the CNS program | XwinNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | AVERAGE STRUCTURE |
| Conformers Calculated Total Number | 1 |
| Conformers Submitted Total Number | 1 |
| Representative Model | 1 (minimized average structure) |
| Additional NMR Experimental Information | |
|---|---|
| Details | This structure was determined using standard 2D proton NMR techniques |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | XwinNMR | 2.6 | Bruker Inc. |
| 2 | structure solution | CNS | 1.0 | Brunger |
| 3 | refinement | CNS | 1.0 | Brunger |
