☰ Navigation Tabs
Apo R268A human aldose reductase
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2ACS PDB ENTRY 2ACS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6 277 PEG6000, AmmSO4, pH 6.0, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.55 51.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.18 α = 90 b = 64.18 β = 90 c = 176.633 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 M SINGLE WAVELENGTH 2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418 2 ROTATING ANODE ELLIOTT GX-6 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 30 0.915 0.062 23.8 22440 20522 10.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.23 79.4 0.134 9 2772
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2ACS 2.1 30 22440 20522 999 91.5 0.17 0.17 0.168 0.1697 0.209 0.2108 RANDOM 22.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.96 1.96 -3.92
RMS Deviations Key Refinement Restraint Deviation o_dihedral_angle_d 25.3 o_scangle_it 5.75 o_scbond_it 4.24 o_mcangle_it 3.03 o_mcbond_it 2.01 o_improper_angle_d 1.45 o_angle_deg 0.9 o_bond_d 0.006 o_bond_d_na o_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation o_dihedral_angle_d 25.3 o_scangle_it 5.75 o_scbond_it 4.24 o_mcangle_it 3.03 o_mcbond_it 2.01 o_improper_angle_d 1.45 o_angle_deg 0.9 o_bond_d 0.006 o_bond_d_na o_bond_d_prot o_angle_d o_angle_d_na o_angle_d_prot o_angle_deg_na o_angle_deg_prot o_dihedral_angle_d_na o_dihedral_angle_d_prot o_improper_angle_d_na o_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2517 Nucleic Acid Atoms Solvent Atoms 202 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing X-PLOR refinement