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structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 HNCA 1mM Delta25-PYP, 15N-13C, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 2 CBCA(CO)NH 1mM Delta25-PYP, 15N-13C, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 3 3D 15N TOCSY-HSQC 1mM Delta25-PYP 15N, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 4 3D_15N-separated_NOESY 1mM Delta25-PYP 15N, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 5 2D NOESY 1mM Delta25-PYP 15N, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 6 2D TOCSY 1mM Delta25-PYP 15N, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 7 HNCO 1mM Delta25-PYP, 15N-13C, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 8 HNCACB 1mM Delta25-PYP, 15N-13C, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293 9 13C filtered 2D NOESY 1mM Delta25-PYP, 15N-13C, 50mM phosphate buffer 90% H2O/10% D2O 50mM phosphate buffer 7 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE 750 3 Bruker AVANCE 500
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 3.1 bruker 2 processing NMRPipe johnson 3 data analysis NMRView 5.0.4 Delaglio 4 structure solution CNS 1.2 Brunger 5 refinement CNS 1.2 Brunger