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Crystal tructure of RNA binding domain of influenza B virus non-structural protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 3.9 278 pH 3.9, VAPOR DIFFUSION, SITTING DROP, temperature 278K
Crystal Properties Matthews coefficient Solvent content 3.1 60
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 102.032 α = 90 b = 102.032 β = 90 c = 108.843 γ = 120
Symmetry Space Group P 64 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2003-09-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4A 0.9197 NSLS X4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 29.6 18879 18879 22.89
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.12
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 29.6 18879 18879 1018 98.99 0.21548 0.21548 0.21335 0.25567 RANDOM 22.898
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.235 r_scangle_it 5.512 r_scbond_it 3.643 r_mcangle_it 2.268 r_angle_refined_deg 2.211 r_mcbond_it 1.361 r_angle_other_deg 1.072 r_symmetry_hbond_refined 0.466 r_symmetry_vdw_refined 0.43 r_xyhbond_nbd_refined 0.331
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.235 r_scangle_it 5.512 r_scbond_it 3.643 r_mcangle_it 2.268 r_angle_refined_deg 2.211 r_mcbond_it 1.361 r_angle_other_deg 1.072 r_symmetry_hbond_refined 0.466 r_symmetry_vdw_refined 0.43 r_xyhbond_nbd_refined 0.331 r_symmetry_vdw_other 0.291 r_nbd_refined 0.272 r_nbd_other 0.256 r_chiral_restr 0.138 r_nbtor_other 0.101 r_bond_refined_d 0.03 r_gen_planes_refined 0.01 r_gen_planes_other 0.005 r_bond_other_d 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1423 Nucleic Acid Atoms Solvent Atoms 234 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing