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Dimeric structure of the C-terminal domain of Vpr
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D TOCSY 1mM Vpr(52-96); 63% H2O, 7% D2O, 30% CD3CN 63% H2O, 7% D2O, 30% CD3CN 3 ambient 303 2 2D NOESY 1mM Vpr(52-96); 63% H2O, 7% D2O, 30% CD3CN 63% H2O, 7% D2O, 30% CD3CN 3 ambient 303 3 DQF-COSY 1mM Vpr(52-96); 63% H2O, 7% D2O, 30% CD3CN 63% H2O, 7% D2O, 30% CD3CN 3 ambient 303 4 2D 15N-HSQC 1mM Vpr(52-96); 63% H2O, 7% D2O, 30% CD3CN 63% H2O, 7% D2O, 30% CD3CN 3 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software restrained simulated annealing, molecular dynamics, energy minimization the structures are based on 573 NOE-derived distance constraints. XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy, structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 3.0 Bruker 2 processing XwinNMR 3.0 Bruker 3 data analysis Felix 98.0 Accelrys 4 refinement X-PLOR 3.851