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Human Eg5 motor domain bound to Mg-ADP and monastrol
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other Chain building into electron density map obtained from Solve using MAD
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.9 275 PEG3350, ammonium tartrate, potassium chloride, adenosine diphosphate, monastrol, sodium azide, PIPES, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 275K
Crystal Properties Matthews coefficient Solvent content 2.75 55.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.706 α = 90 b = 79.648 β = 90 c = 159.451 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2003-12-12 M MAD 2 1 x-ray 100 CCD ADSC QUANTUM 210 2003-12-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.1 0.9641, 0.9794, 0.9797 ALS 8.2.1 2 SYNCHROTRON ALS BEAMLINE 8.2.1 0.9919 ALS 8.2.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.7 20 95.7 10 98099 93881 2 2 13.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.7 1.76 73.6 4.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT Chain building into electron density map obtained from Solve using MAD 1.8 19.93 82941 80785 8076 97.4 0.205 0.203 0.203 0.225 RANDOM 23.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.12 -1.13 2.25
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.4 c_scangle_it 3.59 c_scbond_it 2.43 c_mcangle_it 2.17 c_mcbond_it 1.33 c_angle_deg 1.2 c_improper_angle_d 0.72 c_bond_d 0.005 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.4 c_scangle_it 3.59 c_scbond_it 2.43 c_mcangle_it 2.17 c_mcbond_it 1.33 c_angle_deg 1.2 c_improper_angle_d 0.72 c_bond_d 0.005 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5237 Nucleic Acid Atoms Solvent Atoms 698 Heterogen Atoms 96
Software Software Software Name Purpose CNS refinement Blu-Ice data collection SCALEPACK data scaling SOLVE phasing