1X26 | pdb_00001x26

Solution structure of the AA-mismatch DNA complexed with naphthyridine-azaquinolone

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D TOCSY	50mM phosphate buffer NA, 100mM NaCl, 0.1mM EDTA	90% H2O/10% D2O	150	6.5	ambient	293
2	2D NOESY	50mM phosphate buffer NA, 100mM NaCl, 0.1mM EDTA	90% H2O/10% D2O	150	6.5	ambient	293
3	2D TOCSY	150	6.5	ambient	303
4	2D NOESY	150	6.5	ambient	303
5	DQF-COSY	50mM phosphate buffer NA, 100mM NaCl, 0.1mM EDTA	90% H2O/10% D2O	150	6.5	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	500
2	Bruker	DRX	800

NMR Refinement
Method	Details	Software
simulated annealing		MARDIGRAS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	150
Conformers Submitted Total Number	30
Representative Model	1 (lowest energy)

Additional NMR Experimental Information
Details	This structure was determined using standard 2D homonuclear techniques

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	MARDIGRAS	3.0	Liu, H.
2	structure solution	CNS	1.1	Brunger, A.T.

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.