☰ Navigation Tabs
SINDBIS VIRUS CAPSID PROTEIN (114-264)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other SINDBIS VIRUS CAPSID PROTEIN MUTANT (S215A, 106-266) IN TRICLINIC CRYSTAL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 20-26%(W/V) PEG 8000, 100 MM SODIUM CACODYLATE, PH6.5, 150MM SODIUM ACETATE, 6%(V/V) DIOXANE
Crystal Properties Matthews coefficient Solvent content 2 38.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.98 α = 109.4 b = 59.54 β = 101.5 c = 71.05 γ = 90.14
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE RIGAKU BENT FOCUSING MIRROR 1995-10-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 78.3 0.028 16 1.9 28851 1 15.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.05 28.8 0.089 6 1.6
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT SINDBIS VIRUS CAPSID PROTEIN MUTANT (S215A, 106-266) IN TRICLINIC CRYSTAL 2 8 1 28043 1365 78 0.197 0.197 0.1843 0.268 0.2413 RANDOM 15.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 26.87 x_angle_deg 1.734 x_improper_angle_d 1.571 x_bond_d 0.01 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 26.87 x_angle_deg 1.734 x_improper_angle_d 1.571 x_bond_d 0.01 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot x_mcbond_it x_mcangle_it x_scbond_it x_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4696 Nucleic Acid Atoms Solvent Atoms 469 Heterogen Atoms 30
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement HKL data reduction HKL data scaling X-PLOR phasing