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Crystal structure of recombinant murine interferon beta
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.3 288 Ammonium Sulfate, dioxane, acetate buffer, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 288K
Crystal Properties Matthews coefficient Solvent content 2.97 59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.4 α = 90 b = 71.4 β = 90 c = 79.6 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray DIFFRACTOMETER WEISSENBERG 1993-12-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-6A 1.04 Photon Factory BL-6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 10 66.2 0.048 4.18 22157 14666 3 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.88 12.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.15 7.95 10525 10525 1182 100 0.1973 0.1973 0.19162 0.1905 0.24731 0.2456 RANDOM 38.011
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.25 0.12 0.25 -0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.763 r_dihedral_angle_4_deg 26.3 r_dihedral_angle_3_deg 19.054 r_scangle_it 4.84 r_dihedral_angle_1_deg 3.181 r_scbond_it 3.145 r_mcangle_it 2.425 r_mcbond_it 1.848 r_angle_refined_deg 1.375 r_nbtor_refined 0.316
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.763 r_dihedral_angle_4_deg 26.3 r_dihedral_angle_3_deg 19.054 r_scangle_it 4.84 r_dihedral_angle_1_deg 3.181 r_scbond_it 3.145 r_mcangle_it 2.425 r_mcbond_it 1.848 r_angle_refined_deg 1.375 r_nbtor_refined 0.316 r_nbd_refined 0.227 r_symmetry_vdw_refined 0.217 r_xyhbond_nbd_refined 0.108 r_chiral_restr 0.093 r_symmetry_hbond_refined 0.081 r_bond_refined_d 0.012 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1394 Nucleic Acid Atoms Solvent Atoms 48 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement WEIS data reduction SCALE data scaling PROTEIN phasing