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Human cytosolic acetoacetyl-CoA thiolase complexed with CoA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 295 ammonium sulfate, lithium sulfate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.99 58.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.86 α = 90 b = 109.83 β = 90 c = 155.69 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 30 96 0.052 17.2 5.2 69372 69372 -3 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.55 1.6 73.4 0.356 3.8 3.3 4749
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.55 10 -3 69103 69103 2187 96.91 0.1073 0.1073 0.10613 0.1245 0.13985 0.156 RANDOM 14.767
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.5 -0.87 0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.419 r_dihedral_angle_3_deg 13.745 r_dihedral_angle_4_deg 10.045 r_dihedral_angle_1_deg 8.6 r_sphericity_free 8.507 r_scangle_it 5.954 r_scbond_it 4.728 r_sphericity_bonded 3.709 r_mcangle_it 3.685 r_mcbond_it 3.417
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.419 r_dihedral_angle_3_deg 13.745 r_dihedral_angle_4_deg 10.045 r_dihedral_angle_1_deg 8.6 r_sphericity_free 8.507 r_scangle_it 5.954 r_scbond_it 4.728 r_sphericity_bonded 3.709 r_mcangle_it 3.685 r_mcbond_it 3.417 r_rigid_bond_restr 2.44 r_angle_refined_deg 1.819 r_mcbond_other 1.632 r_angle_other_deg 0.998 r_symmetry_vdw_other 0.299 r_symmetry_vdw_refined 0.288 r_nbd_refined 0.234 r_symmetry_hbond_refined 0.226 r_xyhbond_nbd_refined 0.215 r_nbd_other 0.194 r_chiral_restr 0.12 r_nbtor_other 0.089 r_bond_refined_d 0.019 r_gen_planes_refined 0.011 r_gen_planes_other 0.009 r_bond_other_d 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2872 Nucleic Acid Atoms Solvent Atoms 585 Heterogen Atoms 81
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling AMoRE phasing