1WHZ

Crystal structure of a hypothetical protein from thermus thermophilus HB8


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION9.2293PegMME, natrium chloride, Bicine, pH 9.2, VAPOR DIFFUSION, temperature 293K
Crystal Properties
Matthew coefficientSolvent content
1.6826.66

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 27.04α = 90
b = 27.91β = 90.31
c = 36.99γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRIGAKU JUPITER 2102004-03-13MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL26B10.9000, 0.979105, 0.979416SPring-8BL26B1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.5236.9999.6864712.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.521.6299.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.5236.99864792299.60.1550.1480.1480.209RANDOM13.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.39-0.23-1.481.09
RMS Deviations
KeyRefinement Restraint Deviation
c_dihedral_angle_d25.4
c_scangle_it3.7
c_angle_deg2.8
c_scbond_it2.58
c_improper_angle_d2.2
c_mcangle_it2.18
c_mcbond_it1.44
c_bond_d0.035
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms576
Nucleic Acid Atoms
Solvent Atoms120
Heterogen Atoms1

Software

Software
Software NamePurpose
CNSrefinement
CrystalCleardata reduction
SCALEPACKdata scaling
SOLVEphasing