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Crystal structure of a hypothetical protein from thermus thermophilus HB8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 9.2 293 PegMME, natrium chloride, Bicine, pH 9.2, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.68 26.66
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 27.04 α = 90 b = 27.91 β = 90.31 c = 36.99 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU JUPITER 210 2004-03-13 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL26B1 0.9000, 0.979105, 0.979416 SPring-8 BL26B1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.52 36.99 99.6 8647 12.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.52 1.62 99.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.52 36.99 8647 922 99.6 0.155 0.148 0.148 0.1487 0.209 0.2087 RANDOM 13.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.39 -0.23 -1.48 1.09
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 25.4 c_scangle_it 3.7 c_angle_deg 2.8 c_scbond_it 2.58 c_improper_angle_d 2.2 c_mcangle_it 2.18 c_mcbond_it 1.44 c_bond_d 0.035
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 576 Nucleic Acid Atoms Solvent Atoms 120 Heterogen Atoms 1
Software Software Software Name Purpose CNS refinement CrystalClear data reduction SCALEPACK data scaling SOLVE phasing