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T. celer L30e E90A variant
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1H7M PDB ENTRY 1H7M
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 pH 6.50
Crystal Properties Matthews coefficient Solvent content 1.83 32.63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 23.023 α = 90 b = 53.889 β = 109.22 c = 34.047 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.1 SRS PX14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 21.7 99.6 0.07 19.1 4 8679
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.79 99.8 0.08 13.4 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1H7M 1.7 32.11 8244 411 99.5 0.175 0.174 0.1836 0.198 0.2061 RANDOM 11.15
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.19 -0.13 -0.21 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.186 r_dihedral_angle_3_deg 12.874 r_dihedral_angle_4_deg 10.709 r_dihedral_angle_1_deg 5.148 r_scangle_it 3.515 r_scbond_it 2.595 r_angle_refined_deg 1.399 r_mcangle_it 1.259 r_mcbond_it 1.15 r_angle_other_deg 0.781
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.186 r_dihedral_angle_3_deg 12.874 r_dihedral_angle_4_deg 10.709 r_dihedral_angle_1_deg 5.148 r_scangle_it 3.515 r_scbond_it 2.595 r_angle_refined_deg 1.399 r_mcangle_it 1.259 r_mcbond_it 1.15 r_angle_other_deg 0.781 r_symmetry_vdw_other 0.233 r_nbd_refined 0.213 r_nbtor_refined 0.179 r_nbd_other 0.166 r_xyhbond_nbd_refined 0.129 r_symmetry_hbond_refined 0.121 r_symmetry_vdw_refined 0.107 r_chiral_restr 0.086 r_nbtor_other 0.083 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 749 Nucleic Acid Atoms Solvent Atoms 94 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling MOLREP phasing