1VD4

Solution structure of the zinc finger domain of TFIIE alpha


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
23D_15N-separated_NOESY3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
3HNHA3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
4HNCA-J3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
5HNHB3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
6HN(CO)HB3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
7HNCG3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
8HN(CO)CG3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT90% H2O/10% D2O50mM NaCl6.0ambient305
92D NOESY3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT99.9% D2O50mM NaCl6.0ambient305
103D_13C-separated_NOESY3-4mM TFIIE alpha Zinc finger domain, U-15N, U-15N, 13C; 20mM potassium phosphate beffer, 0.03mM ZnCl2, 5mM d-DTT99.9% D2O50mM NaCl6.0ambient305
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDRX500
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealingXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model20 (lowest energy)
Additional NMR Experimental Information
DetailsThe structures were determined using triple-resonance NMR spectroscopy
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6BRUKER
2processingNMRPipeDelaglio, F. et al
3data analysisNMRView5Johnson, B.A. & Blevins, R.A
4structure solutionX-PLOR3.851Brnger, A.T.
5refinementX-PLOR3.851