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Crystal structure of PriB- a primosomal DNA replication protein of Escherichia coli
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.7 pH 5.70
Crystal Properties Matthews coefficient Solvent content 1.9 33.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 39.322 α = 90 b = 57.358 β = 90 c = 97.019 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE RIGAKU IMAGE PLATE MIRRORS M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSRRC BEAMLINE BL17B2 1.0083, 1.0093, 0.9921, 1.0249 NSRRC BL17B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 23.17 99.9 0.083 14.1 3.6 13751 2 13.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.2 99.6 0.561 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.1 23.17 2 10679 1092 79.9 0.206 0.206 0.2016 0.263 0.2574 RANDOM 40.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 8.86 -6.54 -2.32
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 26.7 c_mcangle_it 3.43 c_scangle_it 2.89 c_mcbond_it 1.93 c_scbond_it 1.86 c_angle_deg 1.3 c_improper_angle_d 0.74 c_bond_d 0.006 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 26.7 c_mcangle_it 3.43 c_scangle_it 2.89 c_mcbond_it 1.93 c_scbond_it 1.86 c_angle_deg 1.3 c_improper_angle_d 0.74 c_bond_d 0.006 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1704 Nucleic Acid Atoms Solvent Atoms 134 Heterogen Atoms 21
Software Software Software Name Purpose CNS refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing