1TXY

E. coli PriB


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.5298PEG 8000, Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthew coefficientSolvent content
2.1341

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 49.902α = 90
b = 60.294β = 90
c = 66.304γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray110CCDADSC QUANTUM 42004-06-10MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.3.11.0200, 0.9798, 0.9797ALS8.3.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
123499.91607016070
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.199.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT220132881328869399.720.260090.260090.258840.28485RANDOM22.371
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.01-0.161.18
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.493
r_dihedral_angle_1_deg4.188
r_scangle_it3.739
r_scbond_it2.417
r_mcangle_it1.511
r_angle_refined_deg1.147
r_mcbond_it0.874
r_symmetry_vdw_refined0.317
r_nbd_refined0.292
r_symmetry_hbond_refined0.226
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.493
r_dihedral_angle_1_deg4.188
r_scangle_it3.739
r_scbond_it2.417
r_mcangle_it1.511
r_angle_refined_deg1.147
r_mcbond_it0.874
r_symmetry_vdw_refined0.317
r_nbd_refined0.292
r_symmetry_hbond_refined0.226
r_xyhbond_nbd_refined0.172
r_chiral_restr0.08
r_bond_refined_d0.012
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1375
Nucleic Acid Atoms
Solvent Atoms140
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
SOLVEphasing