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TRANSTHYRETIN-V/122/I CARDIOMYOPATHIC MUTANT
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other WILD-TYPE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.3 pH 5.3
Crystal Properties Matthews coefficient Solvent content 2.2 44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.23 α = 90 b = 85.64 β = 90 c = 65.5 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 287 IMAGE PLATE MARRESEARCH 1994-10-15 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 10 96 0.072 19566
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT WILD TYPE TRANSTHYRETIN 1.9 10 19566 0.158 0.1549 25
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 19.81 p_transverse_tor 17.258 p_scangle_it 11.696 p_scbond_it 8.125 p_mcangle_it 4.6 p_planar_tor 3.395 p_mcbond_it 3.043 p_xyhbond_nbd 0.6 p_multtor_nbd 0.262 p_singtor_nbd 0.185
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 19.81 p_transverse_tor 17.258 p_scangle_it 11.696 p_scbond_it 8.125 p_mcangle_it 4.6 p_planar_tor 3.395 p_mcbond_it 3.043 p_xyhbond_nbd 0.6 p_multtor_nbd 0.262 p_singtor_nbd 0.185 p_chiral_restr 0.179 p_planar_d 0.033 p_angle_d 0.027 p_bond_d 0.019 p_angle_deg p_hb_or_metal_coord p_plane_restr p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1798 Nucleic Acid Atoms Solvent Atoms 168 Heterogen Atoms
Software Software Software Name Purpose CCP4 model building CCP4 refinement DENZO data reduction SCALEPACK data scaling CCP4 phasing