Solution NMR Structure of Protein yqfB from Escherichia coli. Northeast Structural Genomics Consortium Target ET99
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | GFT (4,3)D HNNCABCA | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
| 2 | GFT (4,3)D CABCA(CO)NHN | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
| 3 | GFT (5,2)D HACACONHN | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
| 4 | GFT (4,3)D HCCH COSY | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
| 5 | 3D 15N,13Caliphatic,13Caromatic-resolved [1H,1H]-NOESY | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics with DYANA | PROSA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations,lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | PROSA | 6 | Guentert |
| 2 | data analysis | XEASY | 1 | Bartels, C |
| 3 | data analysis | AutoAssign | 1 | Moseley, H.N.M. |
| 4 | refinement | DYANA | 5 | Guentert, P. |














