X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52770.25 M magnesium acetate 0.1 M sodium cacodylate buffer, 17% PEG8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.5851.93

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 88.434α = 90
b = 88.434β = 90
c = 128.995γ = 120
Symmetry
Space GroupP 32

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42002-11-04MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-10.934ESRFID14-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.829.7489.1104587931871.412
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.999.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1T6E, 1UKR1.829.7494039940391051199.970.160680.161610.158280.19171RANDOM14.576
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.110.050.11-0.16
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.89
r_scangle_it2.891
r_scbond_it1.827
r_angle_refined_deg1.364
r_mcangle_it1.177
r_angle_other_deg0.78
r_mcbond_it0.639
r_symmetry_vdw_refined0.346
r_symmetry_hbond_refined0.339
r_nbd_other0.253
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.89
r_scangle_it2.891
r_scbond_it1.827
r_angle_refined_deg1.364
r_mcangle_it1.177
r_angle_other_deg0.78
r_mcbond_it0.639
r_symmetry_vdw_refined0.346
r_symmetry_hbond_refined0.339
r_nbd_other0.253
r_symmetry_vdw_other0.227
r_nbd_refined0.199
r_xyhbond_nbd_refined0.14
r_nbtor_other0.083
r_chiral_restr0.082
r_bond_refined_d0.01
r_gen_planes_refined0.006
r_gen_planes_other0.004
r_bond_other_d0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8044
Nucleic Acid Atoms
Solvent Atoms1074
Heterogen Atoms24

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
AMoREphasing