1T0T

Crystallographic structure of a putative chlorite dismutase


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP273VAPOR DIFFUSION, HANGING DROP, temperature 273K
Crystal Properties
Matthews coefficientSolvent content
2.753.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 202.839α = 90
b = 202.839β = 90
c = 202.839γ = 90
Symmetry
Space GroupI 2 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDCUSTOM-MADE2003-10-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-IDAPS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.75251369201
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.751.7999.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.7525138148131204693499.80.1580.1560.194RANDOM21.18
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.671
r_dihedral_angle_4_deg18.154
r_dihedral_angle_3_deg13.39
r_dihedral_angle_1_deg6.556
r_scangle_it6.271
r_scbond_it4.685
r_mcangle_it2.922
r_mcbond_it2.61
r_angle_refined_deg1.716
r_angle_other_deg0.955
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.671
r_dihedral_angle_4_deg18.154
r_dihedral_angle_3_deg13.39
r_dihedral_angle_1_deg6.556
r_scangle_it6.271
r_scbond_it4.685
r_mcangle_it2.922
r_mcbond_it2.61
r_angle_refined_deg1.716
r_angle_other_deg0.955
r_mcbond_other0.541
r_symmetry_vdw_other0.347
r_symmetry_hbond_refined0.269
r_nbd_refined0.242
r_nbd_other0.238
r_xyhbond_nbd_refined0.228
r_symmetry_vdw_refined0.215
r_nbtor_refined0.197
r_chiral_restr0.117
r_nbtor_other0.087
r_xyhbond_nbd_other0.069
r_gen_planes_refined0.019
r_bond_refined_d0.018
r_gen_planes_other0.007
r_bond_other_d0.001
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9980
Nucleic Acid Atoms
Solvent Atoms1295
Heterogen Atoms145

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SOLVEphasing