X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.529810% PEG 3000, 30% PEG 400, 0.1M Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.0640

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.801α = 90
b = 109.957β = 90
c = 49.951γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2003-10-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM30A0.979678ESRFBM30A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.93596.90.06321.94.35271642240
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.91.9495.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2102317422018115697.260.2580.201750.198940.25436RANDOM40.579
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.14-1.612.75
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.22
r_mcangle_it3.288
r_scangle_it3.194
r_mcbond_it2.162
r_scbond_it2.096
r_angle_other_deg0.932
r_angle_refined_deg0.743
r_symmetry_vdw_other0.35
r_symmetry_vdw_refined0.348
r_nbd_other0.273
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.22
r_mcangle_it3.288
r_scangle_it3.194
r_mcbond_it2.162
r_scbond_it2.096
r_angle_other_deg0.932
r_angle_refined_deg0.743
r_symmetry_vdw_other0.35
r_symmetry_vdw_refined0.348
r_nbd_other0.273
r_symmetry_hbond_refined0.239
r_nbd_refined0.23
r_xyhbond_nbd_refined0.217
r_chiral_restr0.132
r_nbtor_other0.101
r_metal_ion_refined0.078
r_gen_planes_refined0.012
r_gen_planes_other0.006
r_bond_refined_d0.003
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2823
Nucleic Acid Atoms
Solvent Atoms108
Heterogen Atoms64

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing