1SXN

REDUCED BOVINE SUPEROXIDE DISMUTASE AT PH 5.0


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1excess nitrogen atmosphere520 % PEG6K, 20MM HEPES PH 5.0, SODIUM DITHIONITE (EXCESS), NITROGEN ATMOSPHERE, excess nitrogen atmosphere
Crystal Properties
Matthews coefficientSolvent content
4.573

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 104.69α = 90
b = 197.8β = 90
c = 50.83γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray277IMAGE PLATEMARRESEARCHMIRRORS1995-11-26M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X11EMBL/DESY, HAMBURGX11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.92097.20.0910.958.55209202
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.91.95980.0750.2993.53.4

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTPDB ENTRY 1SXC1.9103896838968980.1825.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor35.77
p_staggered_tor12.357
p_scangle_it7.026
p_scbond_it4.728
p_mcangle_it3.645
p_mcbond_it2.396
p_planar_tor1.81
p_multtor_nbd0.257
p_xyhbond_nbd0.209
p_singtor_nbd0.193
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor35.77
p_staggered_tor12.357
p_scangle_it7.026
p_scbond_it4.728
p_mcangle_it3.645
p_mcbond_it2.396
p_planar_tor1.81
p_multtor_nbd0.257
p_xyhbond_nbd0.209
p_singtor_nbd0.193
p_chiral_restr0.142
p_angle_d0.046
p_planar_d0.044
p_bond_d0.014
p_plane_restr0.011
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2128
Nucleic Acid Atoms
Solvent Atoms376
Heterogen Atoms8

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
CCP4refinement