1SOH
The structure of human apolipoprotein C-II in dodecyl phosphocholine
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1.8 mM U-15N apoC-II,85 mM DPC, 20 mM sodium acetate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 5.0 | ambient | 308 | ||
2 | 3D_15N-separated TOCSY | 1.8 mM U-15N apoC-II,85 mM DPC, 20 mM sodium acetate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 5.0 | ambient | 308 | ||
3 | HNHA | 1.8 mM U-15N apoC-II,85 mM DPC, 20 mM sodium acetate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 5.0 | ambient | 308 | ||
4 | HNHB | 1.8 mM U-15N apoC-II,85 mM DPC, 20 mM sodium acetate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 5.0 | ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
Torsion angle simulated annealing with final Cartesian refinement stage | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | Structures with minimal restraint violations and favourable non-bond energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 18 |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, F. | |
2 | data analysis | XEASY | 1.2 | Bartels, C. |
3 | structure solution | CNS | 1.0 | Brunger, A. |
4 | refinement | CNS | 1.0 | Brunger, A. |