IMMOBILE SLIPPED-LOOP STRUCTURE (SLS) OF DNA HOMODIMER IN SOLUTION, NMR, 9 STRUCTURES
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NOESY | 7.0 | 283 | |||||
| 2 | DQF-COSY | 7.0 | 283 | |||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | UNITYPLUS | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| COMPLETE RELAXATION MATRIX ANALYSIS, SIMULATED ANNEALING, DISTANCE-RESTRAINED MINIMIZATION, DISTANCE-RESTRAINED MONTE CARLO | DYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | SCORING FUNCTION (WEIGHTED SUM OF DISTANCE RESTRAINTS VIOLATION AND CONFORMATIONAL ENERGY) |
| Conformers Calculated Total Number | 9 |
| Conformers Submitted Total Number | 9 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | DYANA | GUNTERT,WUTHRICH | |
| 2 | structure solution | Sparky | ||
| 3 | structure solution | MARDIGRAS | ||
| 4 | structure solution | DYANA | ||
| 5 | structure solution | DNAminiCarlo | ||
| 6 | structure solution | AMBER4.1 | ||
| 7 | structure solution | CORMA | ||
