Solution structure of the KIX domain of CBP bound to the transactivation domain of c-Myb
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 20 mM Tris d11 acetate d4; 50 mM NaCl; 2 mM NaN3; pH 5.5 | 90% H20; 10% D2O | 50 mM | 5.5 | ambient | 27 | |
| 2 | 2D TOCSY | 20 mM Tris d11 acetate d4; 50 mM NaCl; 2 mM NaN3; pH 5.5 | 90% H20; 10% D2O | 50 mM | 5.5 | ambient | 27 | |
| 3 | 3D_13C-separated_NOESY | 20 mM Tris d11 acetate d4; 50 mM NaCl; 2 mM NaN3; pH 5.5 | 90% H20; 10% D2O | 50 mM | 5.5 | ambient | 27 | |
| 4 | 3D_15N-separated_NOESY | 20 mM Tris d11 acetate d4; 50 mM NaCl; 2 mM NaN3; pH 5.5 | 90% H20; 10% D2O | 50 mM | 5.5 | ambient | 27 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| 2 | Bruker | AVANCE | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| initial structures from DYANA and refined in AMBER | DYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | DYANA | 1.5 | Peter Guntert |
| 2 | refinement | Amber | 7 | David Case et al. |
| 3 | processing | NMRPipe | Delaglio, F. et al. | |
| 4 | data analysis | NMRView | 4.3.1 | Johnson, B. |














