Structure of the Calcium Free Form of the C-type Lectin-like Domain of Tetranectin
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | 0.6 mM U-15N-13C; | 90% H20, 10% D20, 1 mM NaN3, 2 mM EDTA, pH 6.7 | 1 mM NaN3, 2 mM EDTA | 6.7 | 1 atm | 298 | |
| 2 | 3D_13C-separated_NOESY | 0.6 mM U-15N-13C; | 90% H20, 10% D20, 1 mM NaN3, 2 mM EDTA, pH 6.7 | 1 mM NaN3, 2 mM EDTA | 6.7 | 1 atm | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | UNITY | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing protocol with an explicit layer of water | The structure is based on 1552 NOE-derived distance restraints and 194 Dihedral angle restraints. | VNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | all calculated structures submitted |
| Conformers Calculated Total Number | 20 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | The structure was determined using standard spectra from the Varian Protein NMR pack. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | VNMR | 6.1 | Varian |
| 2 | processing | NMRPipe | 1 | Delaglio |
| 3 | data analysis | Pronto | 20020313 | Kjaer |
| 4 | data analysis | X-PLOR | 98.1 | Brunger |
| 5 | structure solution | CYANA | 1.0.6 | Guentert |
| 6 | structure solution | CNS | 1.1 | Brunger |
| 7 | refinement | CNS | 1.1 | Brunger |
