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NEW CRYSTAL FORM OF PSEUDOMONAS GLUMAE (FORMERLY CHROMOBACTERIUM VISCOSUM ATCC 6918) LIPASE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1CVL PDB ENTRY 1CVL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.8 PROTEIN WAS CRYSTALLIZED FROM 10 % PEG 6000, 5 % PEG 1000, 100 MM HEPES BUFFER,
PH 7.8
Crystal Properties Matthews coefficient Solvent content 1.9 35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.98 α = 90 b = 43.35 β = 90 c = 140.69 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 IMAGE PLATE MARRESEARCH MIRRORS 1996-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 100 98.6 0.067 10.5 3.4 28124 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.73 94.4 0.27 4.1 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1CVL 1.7 20 28058 1410 98.6 0.213 0.187 0.228 RANDOM 14.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 12.2 p_scangle_it 1.817 p_mcangle_it 1.495 p_scbond_it 1.193 p_mcbond_it 0.959 p_multtor_nbd 0.263 p_singtor_nbd 0.171 p_chiral_restr 0.104 p_planar_d 0.047 p_angle_d 0.025
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 12.2 p_scangle_it 1.817 p_mcangle_it 1.495 p_scbond_it 1.193 p_mcbond_it 0.959 p_multtor_nbd 0.263 p_singtor_nbd 0.171 p_chiral_restr 0.104 p_planar_d 0.047 p_angle_d 0.025 p_bond_d 0.008 p_angle_deg p_hb_or_metal_coord p_plane_restr p_xhyhbond_nbd p_xyhbond_nbd p_planar_tor p_orthonormal_tor p_transverse_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2315 Nucleic Acid Atoms Solvent Atoms 324 Heterogen Atoms 1
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement