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The Catalytic Subunit of cAMP-dependent Protein Kinase in Complex with Rho-kinase Inhibitor Fasudil (HA-1077)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.4 278 LiCl, MesBisTris, methanol, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 278K
Crystal Properties Matthews coefficient Solvent content 2.38 48.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.33 α = 90 b = 73.67 β = 90 c = 79.08 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 278 AREA DETECTOR SIEMENS X1000 GRAPHITE Monochromator M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 82.4 17661
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.25 59
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 20 17651 16761 890 82.38 0.22 0.22 0.216 0.2163 0.295 0.2986 RANDOM 20.678
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.019 r_scangle_it 3.763 r_scbond_it 2.355 r_angle_refined_deg 1.698 r_mcangle_it 1.51 r_angle_other_deg 0.92 r_mcbond_it 0.839 r_symmetry_hbond_refined 0.409 r_nbd_other 0.228 r_symmetry_vdw_other 0.224
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.019 r_scangle_it 3.763 r_scbond_it 2.355 r_angle_refined_deg 1.698 r_mcangle_it 1.51 r_angle_other_deg 0.92 r_mcbond_it 0.839 r_symmetry_hbond_refined 0.409 r_nbd_other 0.228 r_symmetry_vdw_other 0.224 r_nbd_refined 0.213 r_xyhbond_nbd_refined 0.179 r_symmetry_vdw_refined 0.152 r_chiral_restr 0.103 r_nbtor_other 0.091 r_bond_refined_d 0.019 r_gen_planes_refined 0.007 r_gen_planes_other 0.003 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2947 Nucleic Acid Atoms Solvent Atoms 86 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement ASTRO data reduction SAINT data scaling AMoRE phasing