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 1Q0W | pdb_00001q0w

Solution structure of Vps27 amino-terminal UIM-ubiquitin complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM90% H2O/10% D2O20 mM sodium phosphate, pH 6.0, 0.2% NaN36.01 atm298
22D double half-filtered NOESY1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM90% H2O/10% D2O20 mM sodium phosphate, pH 6.0, 0.2% NaN36.01 atm298
33D_13C-separated_NOESY1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM100% D2O20 mM sodium phosphate, pH 6.0, 0.2% NaN36.01 atm298
42D double half-filtered NOESY1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM100% D2O20 mM sodium phosphate, pH 6.0, 0.2% NaN36.01 atm298
53D 13C-filtered,13C-edited NOESY1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM100% D2O20 mM sodium phosphate, pH 6.0, 0.2% NaN36.01 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
TORSION ANGLE DYNAMICS AND SIMULATED ANNEALINGTHE STRUCTURES ARE BASED ON A TOTAL OF 2138 DISTANCE RESTRAINTS, INCLUDING 2062 NOE-DERIVED DISTANCE RESTRAINTS [1625 UNAMBIGUOUS AND 437 AMBIGUOUS RESTRAINTS], 76 HYDROGEN BONDING DISTANCE RESTRAINTS, AND 112 TORSION ANGLE RESTRAINTS.VNMR
NMR Ensemble Information
Conformer Selection CriteriaThe submitted conformers are the 20 structures with the lowest restraint energies, restraint violations, and RMS deviations from ideal covalent geometry
Conformers Calculated Total Number80
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1BVarian Instruments
2data analysisFelix98.0Accelrys
3refinementCNS1.1Brunger et al.
4refinementARIA1.2Linge and Nilges