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Solution Structure of BmP07, A Novel Potassium Channel Blocker from Scorpion Buthus martensi Karsch, 15 structures
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
DQF-COSY
2.7mM BmP07; 90% H2O, 10% D2O
90% H2O/10% D2O
3.0
ambient
300
2
2D NOESY
2.7mM BmP07; 90% H2O, 10% D2O
90% H2O/10% D2O
3.0
ambient
300
3
2D TOCSY
2.7mM BmP07; 90% H2O, 10% D2O
90% H2O/10% D2O
3.0
ambient
300
4
DQF-COSY
2.7mM BmP07; 100% D2O
100% D2O
3.0
ambient
300
5
2D NOESY
2.7mM BmP07; 100% D2O
100% D2O
3.0
ambient
300
6
2D TOCSY
2.7mM BmP07; 100% D2O
100% D2O
3.0
ambient
300
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
INOVA
600
NMR Refinement
Method
Details
Software
distance geometry
the structures are based on a total of 277 constraints, 249 are NOE-derived distance constraints, 9 dihedral angle constraints, 19 distance constraints from five hydrogen bonds and three disulfide bonds.
VNMR
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
200
Conformers Submitted Total Number
15
Representative Model
1 (lowest energy)
Additional NMR Experimental Information
Details
This structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
VNMR
6.1B
Mike Carlisle, Dan Steele, Mike Miller
2
processing
VNMR
6.1B
Mike Carlisle, Dan Steele, Mike Miller
3
data analysis
XEASY
1994
Tai-he Xia, Christian Bartel
4
structure solution
DYANA
1.5
Peter Guntert, Christian Mumenthaler, Torsten Herrmann
5
refinement
Amber
5.0
Peter Kollman, Dave Case, Ken Merz, Thomas Cheatham, Carlos Simmerling, Vertex Pharmaceuticals