1PT4

Solution structure of the Moebius cyclotide kalata B2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D TOCSY2mM kalata B2 in 0.5ml70% H2O, 20% CH3CN, 10% D2O04ambient298
22D NOESY2mM kalata B2 in 0.5ml70% H2O, 20% CH3CN, 10% D2O04ambient298
3DQF-COSY2mM kalata B2 in 0.5ml70% H2O, 20% CH3CN, 10% D2O04ambient298
42D TOCSY2mM kalata B2 in 0.5ml80% D2O, 20% CH3CN04ambient298
52D NOESY2mM kalata B2 in 0.5ml80% D2O, 20% CH3CN04ambient298
62D TOCSY2mM kalata B2 in 0.5ml70% H2O, 20% CH3CN, 10% D2O04ambient290
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerARX500
2BrukerDMX750
NMR Refinement
MethodDetailsSoftware
Simulated annealing using both torsion angle and Cartesian dynamics.Structure was calculated using torsion angle dynamics within CNS and subsequently refined and energy minimised in a water shell using Cartesian dynamics in CNS according to protocols by Linge and Nilges (ARIA).XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6Bruker
2data analysisXEASY1.3.7Eccles, C., Guntert, P., Billeter, M. and Wuthrich, K.
3structure solutionDYANA1.5Guntert, P., Mumenthaler, C. and Wuthrich, K.
4refinementCNS1.0