1POT

SPERMIDINE/PUTRESCINE-BINDING PROTEIN COMPLEXED WITH SPERMIDINE (MONOMER FORM)


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.2545

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 130.3α = 90
b = 130.3β = 90
c = 38.7γ = 90
Symmetry
Space GroupI 41

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayIMAGE PLATEMACSCIENCE1993-02-01M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.830087.80.091245791

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.861233640.198
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor32.7
p_staggered_tor22.3
p_scangle_it2.243
p_mcangle_it1.866
p_planar_tor1.8
p_scbond_it1.589
p_mcbond_it1.17
p_xyhbond_nbd0.243
p_multtor_nbd0.215
p_singtor_nbd0.186
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor32.7
p_staggered_tor22.3
p_scangle_it2.243
p_mcangle_it1.866
p_planar_tor1.8
p_scbond_it1.589
p_mcbond_it1.17
p_xyhbond_nbd0.243
p_multtor_nbd0.215
p_singtor_nbd0.186
p_chiral_restr0.165
p_planar_d0.046
p_angle_d0.037
p_bond_d0.013
p_plane_restr0.011
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2519
Nucleic Acid Atoms
Solvent Atoms327
Heterogen Atoms10

Software

Software
Software NamePurpose
PROLSQrefinement
WELMSdata reduction