Experiment: 1PN0

X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	1FOH	PDB ID ENTRY 1FOH

Crystallization

Crystal Properties
Matthews coefficient	Solvent content
2.62	53

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 99.999	α = 90
b = 150.948	β = 114.63
c = 114.962	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	AREA DETECTOR	MARRESEARCH		2001-06-17	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	EMBL/DESY, HAMBURG BEAMLINE BW7B	0.8452	EMBL/DESY, HAMBURG	BW7B

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.68	20	83.9	0.024	23	2.1	297900	297900		-3	22.3

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.68	1.7	38.7		0.256	2.2	0.77	3440

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	FOURIER SYNTHESIS	THROUGHOUT	PDB ID ENTRY 1FOH	1.7	19.96	277056	277056	14783	86.12	0.15816	0.15698	0.15698	0.16	0.17988	0.18	RANDOM	12.127

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
2.8		0.93	-3.21		1.18

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	15.765
r_scangle_it	4.417
r_dihedral_angle_1_deg	4.403
r_scbond_it	2.793
r_mcangle_it	1.79
r_angle_refined_deg	1.389
r_mcbond_it	1.074
r_symmetry_vdw_refined	0.277
r_symmetry_hbond_refined	0.226
r_nbd_refined	0.203

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	15.765
r_scangle_it	4.417
r_dihedral_angle_1_deg	4.403
r_scbond_it	2.793
r_mcangle_it	1.79
r_angle_refined_deg	1.389
r_mcbond_it	1.074
r_symmetry_vdw_refined	0.277
r_symmetry_hbond_refined	0.226
r_nbd_refined	0.203
r_xyhbond_nbd_refined	0.141
r_chiral_restr	0.102
r_bond_refined_d	0.012
r_gen_planes_refined	0.006

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	20840
Nucleic Acid Atoms
Solvent Atoms	2688
Heterogen Atoms	244

Software

Software
Software Name	Purpose
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.