1PFS
SOLUTION NMR STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN OF THE FILAMENTOUS PSEUDOMONAS PHAGE PF3, MINIMIZED AVERAGE STRUCTURE
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 13C- AND 15N-EDITED 3D NOESY | 4.4 | 300 | |||||
2 | HMQC-J | 4.4 | 300 | |||||
3 | HAHB | 4.4 | 300 | |||||
4 | HACAHB-COSY | 4.4 | 300 | |||||
5 | HNHB | 4.4 | 300 | |||||
6 | 13C | 4.4 | 300 | |||||
7 | 15N SPIN-ECHO HSQC | 4.4 | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
2 | Bruker | AMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
30 STRUCTURES WERE CALCULATED USING THE GEOMETRIC FORCE FIELD 'PARALLDHG.PRO'. THESE WERE SUBSEQUENTLY REFINED IN A 7 ANGSTROM SHELL OF WATER MOLECULES USING THE OPLS FORCE FIELD (TOPOPLSXX.PRO) AND AVERAGED. THIS AVERAGED STRUCTURE WAS ENERGY MINIMIZED USING AGAIN 'PARALLDHG.PRO'. THE PROGRAM WAS MODIFIED TO USE FLOATING CHIRALITY. CHIRAL-CENTER RESTRAINT (A**3) : 0.352 | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | OVERALL ENERGY |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 1 |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | BRUNGER |