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CATHELIN-LIKE MOTIF OF PROTEGRIN-3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 3.8 291 ammonium sulfate, sodium acetate, pH 3.8, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.15 42.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.541 α = 90 b = 51.541 β = 90 c = 134.512 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH mirrors 2002-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM30A 0.97992 ESRF BM30A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 23.5 99.7 0.078 0.078 13.1 9.5 5162 5162 30.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.36 98.1 0.295 0.295 2.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.3 23.5 5162 4503 659 99.67 0.22713 0.22713 0.21932 0.2842 0.28357 0.3263 RANDOM 16.847
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.46 -0.23 -0.46 0.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.19 r_scangle_it 3.191 r_scbond_it 1.978 r_angle_refined_deg 1.56 r_mcangle_it 1.48 r_angle_other_deg 0.859 r_mcbond_it 0.765 r_symmetry_vdw_other 0.256 r_nbd_refined 0.254 r_nbd_other 0.236
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.19 r_scangle_it 3.191 r_scbond_it 1.978 r_angle_refined_deg 1.56 r_mcangle_it 1.48 r_angle_other_deg 0.859 r_mcbond_it 0.765 r_symmetry_vdw_other 0.256 r_nbd_refined 0.254 r_nbd_other 0.236 r_symmetry_hbond_refined 0.179 r_xyhbond_nbd_refined 0.142 r_symmetry_vdw_refined 0.136 r_nbtor_other 0.101 r_chiral_restr 0.082 r_bond_refined_d 0.016 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 685 Nucleic Acid Atoms Solvent Atoms 35 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SHARP phasing