Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | ~1 mM MPN156 U-15N | 25mM Sodium Phosphate 1 mM DTT 1 mM EDTA 10% D2O | 50 mM NaCl | 6.6 | 1 atm | 298 | |
| 2 | 4D_13C-separated_NOESY | ~1 mM MPN156 U-15N,U-13C | 25mM Sodium Phosphate 1 mM DTT 1 mM EDTA 10% D2O | 50 mM NaCl | 6.6 | 1 atm | 298 | |
| 3 | 4D_13C/15N-separated_NOESY | ~1 mM MPN156 U-15N,U-13C | 25mM Sodium Phosphate 1 mM DTT 1 mM EDTA 10% D2O | 50 mM NaCl | 6.6 | 1 atm | 298 | |
| 4 | HNHA | ~1 mM MPN156 U-15N,U-13C | 25mM Sodium Phosphate 1 mM DTT 1 mM EDTA 10% D2O | 50 mM NaCl | 6.6 | 1 atm | 298 | |
| 5 | H/D Exchange | ~1 mM MPN156 U-15N | 25mM Sodium Phosphate 1 mM DTT 1 mM EDTA 10% D2O | 50 mM NaCl | 6.6 | 1 atm | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 500 |
| 2 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | Refinement details can be found in the primary citation above. | NMRPipe |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | Submitted conformers are those with lowest DYANA target functions. |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 16 |
| Representative Model | 1 (fewest violations) |
| Additional NMR Experimental Information | |
|---|---|
| Details | Deposited structures include residues 6-101 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | 1 | Delaglio |
| 2 | data analysis | NMRView | 5.0.4 | Johnson |
| 3 | refinement | DYANA | 1.5 | Guntert |














