1P9C
NMR solution structure of the C-terminal ubiquitin-interacting motif of the proteasome subunit S5a
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2mM S5a peptide, unlabeled | 50mM sodium phosphate; 100mM sodium chloride; 5% D2O | 150mM | 6.5 | ambient | 300 | |
2 | 3D_13C-separated_NOESY | 2mM S5a peptide U-15N,13C | 50mM sodium phosphate; 100mM sodium chloride; 5% D2O | 150mM | 6.5 | ambient | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | The structures are based on a total of 474 distance restraints, 452 are NOE-derived distance restraints, 22 are from hydrogen bonds | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using standard triple-resonance NMR spectroscopy techniques |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | 2.5 | Bruker Karlsruhe |
2 | data analysis | AURELIA | 2.8.9 | Neidig |
3 | structure solution | X-PLOR | 3.1 | Brunger |
4 | refinement | X-PLOR | 3.1 | Brunger |