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CRYSTAL STRUCTURE OF SHIKIMATE DEHYDROGENASE (AROE) FROM HAEMOPHILUS INFLUENZAE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.8 293 1.0 Sodium Citrate, 0.1M CHES, pH 8.8, VAPOR DIFFUSION, SITTING DROP, temperature 20K
Crystal Properties Matthews coefficient Solvent content 2.64 53.41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.22 α = 90 b = 86.58 β = 90 c = 92.919 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD ADSC QUANTUM 4 2001-11-08 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 0.9786, 0.9792, 0.9537 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 50 99.8 0.059 0.059 9.5 6.8 25244 25244
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.53 99.1 0.253 0.253 2.9 6.1 3603
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.4 20 23847 1286 99.67 0.2305 0.2281 0.27581 RANDOM 25.507
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.74 1.5 -0.77
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 19.917 r_dihedral_angle_1_deg 3.743 r_scangle_it 3.296 r_scbond_it 2.38 r_angle_refined_deg 1.527 r_mcangle_it 1.245 r_mcbond_it 0.746 r_nbd_refined 0.262 r_symmetry_hbond_refined 0.232 r_symmetry_vdw_refined 0.225
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 19.917 r_dihedral_angle_1_deg 3.743 r_scangle_it 3.296 r_scbond_it 2.38 r_angle_refined_deg 1.527 r_mcangle_it 1.245 r_mcbond_it 0.746 r_nbd_refined 0.262 r_symmetry_hbond_refined 0.232 r_symmetry_vdw_refined 0.225 r_xyhbond_nbd_refined 0.187 r_chiral_restr 0.099 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4124 Nucleic Acid Atoms Solvent Atoms 133 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SHELXS phasing