1P6R

Solution structure of the DNA binding domain of the repressor BlaI.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESYU-15N 0.75 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O90% H2O/10% D2O300 mM KCl, 75 mM phosphate sodium7.6ambient298
23D_13C-separated_NOESYU-15N-13C 0.50 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O90% H2O/10% D2O300 mM KCl, 75 mM phosphate sodium7.6ambient298
33D_15N-separated_NOESYU-15N 0.75 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O90% H2O/10% D2O300 mM KCl, 75 mM phosphate sodium7.6ambient298
43D-13C-separated NOESY optimized for CH groupsU-15N-13C 0.50 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O90% H2O/10% D2O300 mM KCl, 75 mM phosphate sodium7.6ambient298
54D 13C-separated-HSQC-NOESY-HSQCU-15N-13C 0.50 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O90% H2O/10% D2O300 mM KCl, 75 mM phosphate sodium7.6ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing, molecular dynamicsFor structure calculation, a total of 1252 interproton and 110 dihedral restraints were used. The distance constraints contain 596 intraresidue, 205 sequential, 87 medium-range, 145 long-range, and 219 ambiguous correlations.Felix
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number80
Conformers Submitted Total Number19
Representative Model19 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix2000Accelrys
2structure solutionDiscover2000Accelrys
3refinementAmber1991Pearlman
4data analysisTALOS1999Cornilescu