1OZ1

P38 MITOGEN-ACTIVATED KINASE IN COMPLEX WITH 4-AZAINDOLE INHIBITOR


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.6290PEG 3350, calcium chloride, Hepes buffer, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 290K
Crystal Properties
Matthews coefficientSolvent content
2.8656.92

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 45.405α = 90
b = 85.454β = 90
c = 125.841γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray110IMAGE PLATEMARRESEARCH1997-08-04MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODESIEMENS1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.12085.80.0997.24.825274-329.2
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.12.1789.30.4554.82605

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.12025244127185.670.203830.201350.25113RANDOM27.741
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.170.151.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.795
r_scangle_it3.564
r_scbond_it2.266
r_mcangle_it1.57
r_angle_refined_deg1.366
r_mcbond_it0.859
r_nbd_refined0.211
r_xyhbond_nbd_refined0.13
r_symmetry_vdw_refined0.127
r_symmetry_hbond_refined0.105
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.795
r_scangle_it3.564
r_scbond_it2.266
r_mcangle_it1.57
r_angle_refined_deg1.366
r_mcbond_it0.859
r_nbd_refined0.211
r_xyhbond_nbd_refined0.13
r_symmetry_vdw_refined0.127
r_symmetry_hbond_refined0.105
r_chiral_restr0.096
r_bond_refined_d0.016
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2779
Nucleic Acid Atoms
Solvent Atoms201
Heterogen Atoms23

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling