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Viscotoxin A3 from Viscum album L.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 0.15M AM2SO4, 0.05M CACOD. PH=6.5, 30% PEG8000, 15MM HGCL2, pH 6.50
Crystal Properties Matthews coefficient Solvent content 1.79 31.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.995 α = 90 b = 68.593 β = 90 c = 25.264 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2002-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X13 EMBL/DESY, HAMBURG X13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 68.59 100 0.0892 14.31 5.25 8938
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.85 99.7 0.3866 3.89 4.42
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD FREE R-VALUE 1.75 20 8893 454 100 0.192 0.1887 0.1717 0.257 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 1 780
RMS Deviations Key Refinement Restraint Deviation s_from_restr_planes 0.293 s_similar_adp_cmpnt 0.067 s_non_zero_chiral_vol 0.042 s_zero_chiral_vol 0.029 s_angle_d 0.021 s_anti_bump_dis_restr 0.021 s_bond_d 0.006 s_similar_dist 0.002 s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 666 Nucleic Acid Atoms Solvent Atoms 94 Heterogen Atoms 15
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELXD phasing SHELXE phasing SHELXL-97 refinement