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The crystal structure of carbapenem synthase (CarC)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 292 PEG 8000, ammonium acetate, isopropanol, Tris, iron sulphate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 2.7 54.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.93 α = 90 b = 163.946 β = 90 c = 146.455 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2002-01-29 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.2 0.9785, 0.9790, 1.0000 SRS PX14.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 81.65 99.7 0.063 9.9 173615 37852
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.46 99.4 0.291 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.4 81.65 37852 35985 1896 99.69 0.22317 0.22317 0.22083 0.2179 0.2678 0.2649 RANDOM 23.398
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.11 0.98 -3.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.741 r_dihedral_angle_1_deg 5.029 r_scangle_it 3.669 r_scbond_it 2.44 r_angle_refined_deg 1.887 r_mcangle_it 1.533 r_mcbond_it 0.849 r_xyhbond_nbd_refined 0.147 r_chiral_restr 0.129 r_nbd_refined 0.129
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 18.741 r_dihedral_angle_1_deg 5.029 r_scangle_it 3.669 r_scbond_it 2.44 r_angle_refined_deg 1.887 r_mcangle_it 1.533 r_mcbond_it 0.849 r_xyhbond_nbd_refined 0.147 r_chiral_restr 0.129 r_nbd_refined 0.129 r_symmetry_hbond_refined 0.123 r_symmetry_vdw_refined 0.111 r_metal_ion_refined 0.084 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6072 Nucleic Acid Atoms Solvent Atoms 243 Heterogen Atoms 33
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SOLVE phasing