RDC-refined NMR structure of bovine Acyl-coenzyme A Binding Protein, ACBP, in complex with palmitoyl-coenzyme A
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | 0.5 mM ACBP, pH 6.5, 0.5 mM palmitoyl-coenzyme A, 5% (3:1) [DMPC:DHPC], 90% H2O, 10% D2O | 90% H2O/10% D2O | no salt added | 6.5 | ambient | 310 | |
| 2 | S3E-HSQC | 0.5 mM ACBP, pH 6.5, 0.5 mM palmitoyl-coenzyme A, 5% (3:1) [DMPC:DHPC], 90% H2O, 10% D2O | 90% H2O/10% D2O | no salt added | 6.5 | ambient | 310 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AMX | 600 |
| 2 | Home-built | home built | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| SIMULATED ANNEALING FOLLOWED BY RESTRAINED MOLECULAR DYNAMICS IN FULL CHARMM FORCE FIELD | X-PLOR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 20 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | REFINEMENT OF EARLIER PDB DEPOSIT, 1ACA, SEE ENTRY FOR DETAILS. NOE AND DIHEDRAL ANGLE CONSTRAINTS OBTAINED AND MODIFIED FROM THIS ENTRY. RESIDUAL DIPOLAR COUPLINGS ADDED AS ADDITIONAL RESTRAINTS. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | X-PLOR | modified 3.8 | Brnger, A. T. |
| 2 | data analysis | Pronto | 20000515 | Kjaer et al. |
| 3 | processing | Felix | ||
| 4 | data analysis | MNMR | ||
