1NRR

Crystallographic structures of Thrombin complexed with Thrombin receptor peptides: Existence of expected and novel binding modes


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.550.77

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 71.3α = 90
b = 72.2β = 100
c = 72.3γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.472129630.145
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor30.7
p_staggered_tor20.5
p_planar_tor3.8
p_scangle_it3.37
p_scbond_it2.24
p_mcangle_it1.58
p_mcbond_it0.91
p_multtor_nbd0.25
p_xhyhbond_nbd0.23
p_singtor_nbd0.2
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor30.7
p_staggered_tor20.5
p_planar_tor3.8
p_scangle_it3.37
p_scbond_it2.24
p_mcangle_it1.58
p_mcbond_it0.91
p_multtor_nbd0.25
p_xhyhbond_nbd0.23
p_singtor_nbd0.2
p_chiral_restr0.17
p_planar_d0.051
p_angle_d0.044
p_plane_restr0.025
p_bond_d0.023
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2271
Nucleic Acid Atoms
Solvent Atoms207
Heterogen Atoms30

Software

Software
Software NamePurpose
PROLSQrefinement