1NC0
U80G U6 Intramolecular Stem-Loop RNA from Saccharomyces cerevisiae
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | U80G U6 ISL | 90% D2O, 10% H2O | 6.5 | 283 | |||
2 | 2D NOESY | U80G U6 ISL | 99% D2O | 6.5 | 303 | |||
3 | 2D TOCSY | U80G U6 ISL | 99% D2O | 6.5 | 303 | |||
4 | 2D H-13C HSQC 13C coupled | U80G U6 ISL-13C/15N | 90% D2O, 10% H2O | 6.5 | 303 | |||
5 | 2D H-13C HSQC 13C coupled | U80G U6 ISL-13C/15N, 17 mg/mL pf1 phage | 90% D2O, 10% H2O | 6.5 | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 500 |
2 | Bruker | DMX | 600 |
3 | Bruker | DMX | 750 |
4 | Bruker | DMX | 400 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics molecular dynamics residual dipolar couplings | The structures are based on 474 NOE derived distance constraints, 179 dihedral angle restraints, and 24 restraints from hydrogen bonds. | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | |
Conformers Calculated Total Number | |
Conformers Submitted Total Number | 18 |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CNS | 1.1 | Brunger, A.T. et. al. |
2 | refinement | X-PLOR | 3.843 | Brunger |