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CRYSTAL STRUCTURE OF HCV NS3 PROTEASE DOMAIN:NS4A PEPTIDE COMPLEX WITH COVALENTLY BOUND INHIBITOR (GW472467X)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 277 Inhibitor soaked into crystal generated according to Kim et al. (1996) Cell, 87, 343-355, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
Crystal Properties Matthews coefficient Solvent content 3.96 68.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 225.45 α = 90 b = 225.45 β = 90 c = 75.89 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IIC MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 40 96.3 0.052 16.6 22723 21878 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.6 2.69 92 0.238 4.5 2074
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 20 1 20724 20724 1115 100 0.18508 0.18508 0.18318 0.2195 RANDOM 45.569
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1 -0.5 -1 1.51
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 8.583 r_dihedral_angle_1_deg 6.551 r_scbond_it 5.492 r_mcangle_it 3.305 r_angle_refined_deg 1.741 r_mcbond_it 1.632 r_symmetry_vdw_refined 0.256 r_nbd_refined 0.237 r_symmetry_hbond_refined 0.232 r_xyhbond_nbd_refined 0.173
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 8.583 r_dihedral_angle_1_deg 6.551 r_scbond_it 5.492 r_mcangle_it 3.305 r_angle_refined_deg 1.741 r_mcbond_it 1.632 r_symmetry_vdw_refined 0.256 r_nbd_refined 0.237 r_symmetry_hbond_refined 0.232 r_xyhbond_nbd_refined 0.173 r_chiral_restr 0.11 r_bond_refined_d 0.016 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2732 Nucleic Acid Atoms Solvent Atoms 107 Heterogen Atoms 31
Software Software Software Name Purpose DENZO data reduction TRUNCATE data reduction REFMAC refinement CCP4 data scaling