1MYQ

An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY2 mM DNA; 10 mM sodium phosphate buffer (pH 6.5); 100 mM KCl;95% H2O/5% D2O100 mM KCl6.5ambient274
22D NOESY2 mM DNA; 10 mM sodium phosphate buffer (pH 6.5);100% D2O100 mM KCl6.5ambient298
32D TOCSY2 mM DNA; 10 mM sodium phosphate buffer (pH 6.5);100% D2O100 mM KCl6.5ambient298
4DQF-COSY2 mM DNA; 10 mM sodium phosphate buffer (pH 6.5);100% D2O100 mM KCl6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number
Conformers Submitted Total Number1
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionX-PLOR3.851Brunger
2refinementX-PLOR3.851Brunger