X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.5289Cacodylate, Calcium chloride, MPD, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
2.1141.12

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.712α = 90
b = 69.581β = 90
c = 75.344γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42002-06-09MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-10.934, 0.9500, 0.9791, 0.9794ESRFID14-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.73099.90.077395433867422
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.761000.217

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.729.753954336644198299.880.189980.187910.22863RANDOM18.529
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.453.54-2.09
RMS Deviations
KeyRefinement Restraint Deviation
r_sphericity_free22.5
r_dihedral_angle_3_deg14.888
r_sphericity_bonded5.771
r_scangle_it4.304
r_dihedral_angle_1_deg3.053
r_scbond_it2.79
r_mcangle_it1.775
r_angle_refined_deg1.205
r_mcbond_it1.017
r_rigid_bond_restr1.013
RMS Deviations
KeyRefinement Restraint Deviation
r_sphericity_free22.5
r_dihedral_angle_3_deg14.888
r_sphericity_bonded5.771
r_scangle_it4.304
r_dihedral_angle_1_deg3.053
r_scbond_it2.79
r_mcangle_it1.775
r_angle_refined_deg1.205
r_mcbond_it1.017
r_rigid_bond_restr1.013
r_symmetry_hbond_refined0.654
r_symmetry_vdw_refined0.332
r_nbd_refined0.237
r_xyhbond_nbd_refined0.163
r_metal_ion_refined0.118
r_chiral_restr0.095
r_bond_refined_d0.01
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2680
Nucleic Acid Atoms
Solvent Atoms234
Heterogen Atoms8

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing
REFMACrefinement