NMR solution structure of chicken Liver basic Fatty Acid Binding Protein (Lb-FABP)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D TOCSY | 1mM Liver basic Fatty Acid Binding Protein; 20mM phosphate buffer | 95% H2O/5% D2O | 20mM phosphate buffer Na | 5.6 | ambient | 310 | |
| 2 | 2D NOESY | 1mM Liver basic Fatty Acid Binding Protein; 20mM phosphate buffer | 95% H2O/5% D2O | 20mM phosphate buffer Na | 5.6 | ambient | 310 | |
| 3 | DQF-COSY | 1mM Liver basic Fatty Acid Binding Protein; 20mM phosphate buffer | 95% H2O/5% D2O | 20mM phosphate buffer Na | 5.6 | ambient | 310 | |
| 4 | 2D TOCSY | 1mM Liver basic Fatty Acid Binding Protein; 20mM phosphate buffer | D2O | 20mM phosphate buffer Na | 5.6 | ambient | 310 | |
| 5 | 2D NOESY | 1mM Liver basic Fatty Acid Binding Protein; 20mM phosphate buffer | D2O | 20mM phosphate buffer Na | 5.6 | ambient | 310 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DMX | 500 |
| 2 | Bruker | DRX | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| Torsion angle Dynamics Simulated annealing Energy minimisation | The structures are based on a total of 1293 non redundant restraints, 1179 are NOE-derived distance constraints, 64 dihedral angle restarints, 50 distance restraints from hydrogen bonds | XwinNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 20 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | XwinNMR | 2.6 | Bruker |
| 2 | data analysis | XEASY | 1.3.13 | Bartels |
| 3 | refinement | DYANA | 1.5 | Guentert |
| 4 | refinement | Discover | 1998 | MSI |
| 5 | data analysis | MOLMOL | 2k.1 | Koradi |














